2024-03-28T17:11:25Z
https://zenodo.org/oai2d
oai:zenodo.org:55262
2020-01-20T14:49:55Z
user-inia
García, J
Sánchez-Padial, A
2016-06-09
<p>Plantilla Excel para añadir a los datasets del Repositorio de Datos de Investigación del INIA </p>
Es obligatorio añadir una copia cumplimentada de este fichero a los datasets que quieran incorporarse a la comunidad INIA de Zenodo
https://doi.org/10.5281/zenodo.55262
oai:zenodo.org:55262
Zenodo
https://zenodo.org/communities/inia
https://doi.org/
info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
Metadata
Agricultural Research
Research Data Management
Template
Plantilla de metadatos INIA
info:eu-repo/semantics/other
oai:zenodo.org:58595
2020-01-24T19:23:42Z
user-inia
openaire_data
Varona Luis
Diaz Clara
Piedrafita Jesus
Baro Jesus Angel
Molina, Antonio
Altarriba, Juan
2016-07-24
<p>A total of 171 triplets (sire/dam/offspring) were collected from seven Spanish beef cattle populations (Asturiana de los Valles, n=25; Avileña-Negra Ibérica; Bruna dels Pirineus, n=25; Morucha, n=25; Pirenaica, n=24; Retinta, n=24; Rubia Gallega, n=24). The parents were chosen by minimizing the genealogical coancestry among them with the aim of capturing the existing variability within the populations.</p>
<p> Individuals were genotyped using the BovineHD 777K BeadChip (Illumina Inc., USA), The SNPs present in the data file belonged to the autosomal chromosomes and those that were in repeated positions were excluded. Additional requirements were Mendelian error rates below 0.05 and call rates over 95% for both, individuals and SNPs. The quality control was made using the PLINK 1.0.7 software. Phasing was performed with BEAGLE with the "trio" option.</p>
<p>Files are on PLINK format with the following name:</p>
<p>Beagle.'Pop'.cromo'Cr'.pre_phase.bgl.phased.</p>
<p>where Pop is from 1 (Asturiana de los Valles) to 7 (Rubia Gallega) and Cr is from 1 to 29.</p>
<p> </p>
<p> </p>
https://doi.org/10.5281/zenodo.58595
oai:zenodo.org:58595
Zenodo
https://zenodo.org/communities/inia
https://doi.org/
info:eu-repo/semantics/openAccess
Creative Commons Zero v1.0 Universal
https://creativecommons.org/publicdomain/zero/1.0/legalcode
Genotypes
Beef Cattle
Spanish
Genotypes for the Spanish Autochthonous Beef Cattle Populations
info:eu-repo/semantics/other