10.5281/zenodo.1208078
https://zenodo.org/records/1208078
oai:zenodo.org:1208078
Kunio Hirata
Kunio Hirata
0000-0002-1491-6509
RIKEN/SPring-8 Center
Br soaked lysozyme datasets collected with the mixed scheme implemented in HITO in the ZOO system
Zenodo
2018
2018-12-18
10.5281/zenodo.1208077
Creative Commons Attribution 4.0 International
Bromide soaked lysozyme crystals were used as standard crystals for evaluation of the automated data collection, ZOO, developed at SPring-8 BL32XU.
Crystals those sizes ranged 10-100 µm were cryocooled together in the same cryoloop and processed 'mixed scheme' implemented in the ZOO system.
Beam size : 10(H) x 15(V) µm2
After 2D raster scanning the loop, HITO detects 1 crystals for full rotation helical, 7 crystals for partial helical, and 62 crystals for multiple small wedge schemes, respectively. A full rotation helical, partial helical and small wedge datasets contain total oscillation of 60 deg, 40 deg and 5 deg. respectively.
The crystals belong to space group P43212 with mean unit cell parameters a=b=79.1, c=37.5.
Data was processed up to 1.50 Å resolution in the published result (Hirata et al. in preparation) using KAMO.
<Available data>
# Beamline: SPring-8 BL32XU
# wavelength 0.9000 A
# Detector : EIGER X 9M
# ZOO mode: mixed scheme (HITO)
#####################################################
# Multiple small wedge datasets
# 'CPS1991-05-multi_master.h5' manages 62 datasets
#####################################################
# 5.0 deg. / datasets
# 0.1 deg. / frame
# 50 frames / datasets
# 100 frames in each data file
#####################################################
hito-CPS1991-05//data/CPS1991-05-multi_data_000001.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000002.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000003.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000004.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000005.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000006.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000007.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000008.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000009.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000010.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000011.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000012.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000013.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000014.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000015.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000016.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000017.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000018.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000019.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000020.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000021.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000022.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000023.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000024.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000025.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000026.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000027.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000028.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000029.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000030.h5
hito-CPS1991-05//data/CPS1991-05-multi_data_000031.h5
hito-CPS1991-05//data/CPS1991-05-multi_master.h5
#####################################################
# 'cry-00-??_master.h5' are for 'partial helical' datasets
#####################################################
# 40.0 deg. / datasets
# 0.1 deg. / frame
# 400 frames / datasets
# 100 frames in each data file
#####################################################
hito-CPS1991-05//data/cry-00-00_data_000001.h5
hito-CPS1991-05//data/cry-00-00_data_000002.h5
hito-CPS1991-05//data/cry-00-00_data_000003.h5
hito-CPS1991-05//data/cry-00-00_data_000004.h5
hito-CPS1991-05//data/cry-00-00_master.h5
hito-CPS1991-05//data/cry-00-01_data_000001.h5
hito-CPS1991-05//data/cry-00-01_data_000002.h5
hito-CPS1991-05//data/cry-00-01_data_000003.h5
hito-CPS1991-05//data/cry-00-01_data_000004.h5
hito-CPS1991-05//data/cry-00-01_master.h5
hito-CPS1991-05//data/cry-00-02_data_000001.h5
hito-CPS1991-05//data/cry-00-02_data_000002.h5
hito-CPS1991-05//data/cry-00-02_data_000003.h5
hito-CPS1991-05//data/cry-00-02_data_000004.h5
hito-CPS1991-05//data/cry-00-02_master.h5
hito-CPS1991-05//data/cry-00-03_data_000001.h5
hito-CPS1991-05//data/cry-00-03_data_000002.h5
hito-CPS1991-05//data/cry-00-03_data_000003.h5
hito-CPS1991-05//data/cry-00-03_data_000004.h5
hito-CPS1991-05//data/cry-00-03_master.h5
hito-CPS1991-05//data/cry-00-04_data_000001.h5
hito-CPS1991-05//data/cry-00-04_data_000002.h5
hito-CPS1991-05//data/cry-00-04_data_000003.h5
hito-CPS1991-05//data/cry-00-04_data_000004.h5
hito-CPS1991-05//data/cry-00-04_master.h5
hito-CPS1991-05//data/cry-00-05_data_000001.h5
hito-CPS1991-05//data/cry-00-05_data_000002.h5
hito-CPS1991-05//data/cry-00-05_data_000003.h5
hito-CPS1991-05//data/cry-00-05_data_000004.h5
hito-CPS1991-05//data/cry-00-05_master.h5
hito-CPS1991-05//data/cry-00-06_data_000001.h5
hito-CPS1991-05//data/cry-00-06_data_000002.h5
hito-CPS1991-05//data/cry-00-06_data_000003.h5
hito-CPS1991-05//data/cry-00-06_data_000004.h5
hito-CPS1991-05//data/cry-00-06_master.h5
#####################################################
# 'cry-01-??_master.h5' are for 'full rotation helical' datasets
#####################################################
# 60.0 deg. / datasets
# 0.1 deg. / frame
# 600 frames / datasets
# 100 frames in each data file
# ** The program could collect 'full rotation' helical dataset
# but 60 deg. was set for this demonstration.
#####################################################
hito-CPS1991-05//data/cry-01-00_data_000001.h5
hito-CPS1991-05//data/cry-01-00_data_000002.h5
hito-CPS1991-05//data/cry-01-00_data_000003.h5
hito-CPS1991-05//data/cry-01-00_data_000004.h5
hito-CPS1991-05//data/cry-01-00_data_000005.h5
hito-CPS1991-05//data/cry-01-00_data_000006.h5
hito-CPS1991-05//data/cry-01-00_master.h5