1215836
doi
10.5281/zenodo.1215836
oai:zenodo.org:1215836
Yu, Dan
Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720
Hansen, Anders S.
Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720
Ganguly, Sourav
Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720
Liu, Rongdiao
School of Pharmaceutical Sciences, Xiamen University, Xiamen, Fujian 361005, China
Heckert, Alec
Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720
Darzacq, Xavier
Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720
Zhou, Qiang
Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720
Single particle tracking data for "Histidine-rich domain of kinases induce phase separation to hyperphosphorylate Pol II CTD"
Lu, Huasong
Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720
info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
Single-particle tracking
Single molecule
Imaging
Spot-On
Cyclin T1
P-TEFb
RNA Polymerase II
<p><strong>Experimental single-particle tracking (SPT) data supporting "Histidine-rich domain of kinases induce phase separation to hyperphosphorylate Pol II CTD"</strong></p>
<p>This dataset contains all the raw SPT data reported in "Histidine-rich domain of kinases induce phase separation to hyperphosphorylate Pol II CTD" in the form of SPT trajectories. The SPT trajectories are provided in two different formats for convenience: a CSV format and a Matlab format. Both formats are readable by Spot-On: https://spoton.berkeley.edu/</p>
<p>The SPT data contains "fast tracking" spaSPT data (Figure 2d) and this data was analyzed using the Matlab version of Spot-On which can be found and downloaded at: https://gitlab.com/tjian-darzacq-lab/spot-on-matlab</p>
<p>The SPT data also contains "slow tracking" SPT data (Figure 2e).</p>
<p>Full details about the Matlab and CSV formats are provided in the ReadMe files in the associated zip files.</p>
<p>Please see the associated manuscript for a detailed description of how the data was acquired and analyzed. For questions about the data please contact Anders Sejr Hansen at anders.sejr.hansen {at} berkeley {dot} edu.</p>
This work was supported by the Public Health Service grant R01AI041757 from the National Institutes of Health to Q.Z; the California Institute of Regenerative Medicine grant LA1-08013 and, National Institutes of Health grants UO1-EB021236 and U54-DK107980 to X.D.; The Siebel Stem Cell Institute to A.S.H.
Zenodo
2018-04-10
info:eu-repo/semantics/other
1215835
1579893925.967382
64595456
md5:a320bb96662c84a5c8a023209179f6c1
https://zenodo.org/records/1215836/files/SPT_data_CSV.zip
74429912
md5:5dbab6b3e6a197d4ef4e320b73732e10
https://zenodo.org/records/1215836/files/SPT_data_MAT.zip
public
10.5281/zenodo.1215835
isVersionOf
doi