Published April 16, 2018
| Version v1.5.2
Software
Open
microPIECE (microRNA pipeline enhanced by CLIP experiments)
- 1. Fraunhofer Institute for Molecular Biology and Applied Ecology, Department of Bioresources, Winchester Str. 2, 35394 Giessen, Germany
- 2. Fraunhofer Institute for Molecular Biology and Applied Ecology, Department of Bioresources, Winchester Str. 2, 35394 Giessen, Germany;Institute for Insect Biotechnology, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
Description
The microPIECE
(microRNA pipeline enhanced by CLIP experiments) takes the AGO-CLIP data from a speciesA and transfers it to a speciesB. Given a set of miRNAs from speciesB it then predicts their targets on the transfered CLIP regions.
The archive of the repository was generated using the following commands:
VERSION=v1.5.2
git clone -b ${VERSION} https://github.com/microPIECE-team/microPIECE.git microPIECE-${VERSION}
rm -rf microPIECE-${VERSION}/.git
rm microPIECE-${VERSION}/.gitignore microPIECE-${VERSION}/.travis.yml
tar czf microPIECE-${VERSION}.tar.gz microPIECE-${VERSION}
Notes
Files
Files
(2.3 MB)
Name | Size | Download all |
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md5:907789cbbaff2060f8d9fdf32d7097ef
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2.3 MB | Download |