June 27, 2022 Dataset Open Access

Correy, Galen J.; Fraser, James S.

DCAT Export

<?xml version='1.0' encoding='utf-8'?>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:adms="http://www.w3.org/ns/adms#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:dctype="http://purl.org/dc/dcmitype/" xmlns:dcat="http://www.w3.org/ns/dcat#" xmlns:duv="http://www.w3.org/ns/duv#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:frapo="http://purl.org/cerif/frapo/" xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#" xmlns:gsp="http://www.opengis.net/ont/geosparql#" xmlns:locn="http://www.w3.org/ns/locn#" xmlns:org="http://www.w3.org/ns/org#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:prov="http://www.w3.org/ns/prov#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:schema="http://schema.org/" xmlns:skos="http://www.w3.org/2004/02/skos/core#" xmlns:vcard="http://www.w3.org/2006/vcard/ns#" xmlns:wdrs="http://www.w3.org/2007/05/powder-s#">
  <rdf:Description rdf:about="https://doi.org/10.5281/zenodo.6974665">
    <rdf:type rdf:resource="http://www.w3.org/ns/dcat#Dataset"/>
    <dct:type rdf:resource="http://purl.org/dc/dcmitype/Dataset"/>
    <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://doi.org/10.5281/zenodo.6974665</dct:identifier>
    <foaf:page rdf:resource="https://doi.org/10.5281/zenodo.6974665"/>
    <dct:creator>
      <rdf:Description rdf:about="http://orcid.org/0000-0001-5155-7325">
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string">0000-0001-5155-7325</dct:identifier>
        <foaf:name>Correy, Galen J.</foaf:name>
        <foaf:givenName>Galen J.</foaf:givenName>
        <foaf:familyName>Correy</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>University of California, San Francisco</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description rdf:about="http://orcid.org/0000-0002-5080-2859">
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string">0000-0002-5080-2859</dct:identifier>
        <foaf:name>Fraser, James S.</foaf:name>
        <foaf:givenName>James S.</foaf:givenName>
        <foaf:familyName>Fraser</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>University of California, San Francisco</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:title>PanDDA files from a ligand screen against the NSP3 macrodomain of SARS-CoV-2 - ligands from fragment merging/linking and virtual screening</dct:title>
    <dct:publisher>
      <foaf:Agent>
        <foaf:name>Zenodo</foaf:name>
      </foaf:Agent>
    </dct:publisher>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#gYear">2022</dct:issued>
    <dcat:keyword>SARS-CoV-2, macrodomain, NSP3, virtual screening, docking, X-ray crystallography</dcat:keyword>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#date">2022-06-27</dct:issued>
    <owl:sameAs rdf:resource="https://zenodo.org/record/6974665"/>
    <adms:identifier>
      <adms:Identifier>
        <skos:notation rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://zenodo.org/record/6974665</skos:notation>
        <adms:schemeAgency>url</adms:schemeAgency>
      </adms:Identifier>
    </adms:identifier>
    <dct:isVersionOf rdf:resource="https://doi.org/10.5281/zenodo.6688238"/>
    <dct:description>&lt;p&gt;This deposition contains the X-ray diffraction data&amp;nbsp;used to run PanDDA&amp;nbsp;in the&amp;nbsp;ligand screen against the NSP3 macrodomain of SARS-CoV-2 described in Gahbauer et al. 2022 (doi: https://doi.org/10.1101/2022.06.27.497816).&lt;/p&gt; &lt;p&gt;mac1_pandda.zip contains the structure factor intensities,&amp;nbsp;PanDDA input/ouput and&amp;nbsp;refined models/maps.&amp;nbsp;A description of the files can be found in the README&amp;nbsp;file.&amp;nbsp;&lt;/p&gt; &lt;p&gt;mac1_ligand-bound_states.zip contains the ligand-bound states extracted from the multi-state PDB files.&amp;nbsp;&lt;/p&gt;</dct:description>
    <dct:accessRights rdf:resource="http://publications.europa.eu/resource/authority/access-right/PUBLIC"/>
    <dct:accessRights>
      <dct:RightsStatement rdf:about="info:eu-repo/semantics/openAccess">
        <rdfs:label>Open Access</rdfs:label>
      </dct:RightsStatement>
    </dct:accessRights>
    <dcat:distribution>
      <dcat:Distribution>
        <dct:license rdf:resource="https://creativecommons.org/licenses/by/4.0/legalcode"/>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.6974665"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.6974665"/>
        <dcat:byteSize>27195404</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/6974665/files/mac1_ligand-bound_states.zip"/>
        <dcat:mediaType>application/zip</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.6974665"/>
        <dcat:byteSize>11545843732</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/6974665/files/mac1_pandda.zip"/>
        <dcat:mediaType>application/zip</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.6974665"/>
        <dcat:byteSize>1904</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/6974665/files/README"/>
      </dcat:Distribution>
    </dcat:distribution>
  </rdf:Description>
</rdf:RDF>