This documentation is for version 2.0.dev, which is not released yet.
nw_align(seqA, seqB[, scorer, gap]) | Carry out the traditional Needleman-Wunsch algorithm. |
sw_align(seqA, seqB[, scorer, gap]) | Carry out the traditional Smith-Waterman algorithm. |
we_align(seqA, seqB[, scorer, gap]) | Carry out the traditional Waterman-Eggert algorithm. |
edit_dist(seqA, seqB[, normalized]) | Return the edit distance between two strings. |
SCA(infile, **keywords) | Method returns alignment objects depending on input file. |