This documentation is for version 2.0.dev, which is not released yet.
mult_align(seqs[, gop, scale, tree_calc, pprint]) | A short-cut method for multiple alignment analyses. |
SCA(infile, **keywords) | Method returns alignment objects depending on input file. |
Multiple(seqs, **keywords) | Basic class for multiple sequence alignment analyses. |
MSA(infile, **keywords) | Basic class for carrying out multiple sequence alignment analyses. |
Alignments(infile[, row, col, conf, ...]) | Class handles Wordlists for the purpose of alignment analyses. |