Parameters : | mode : { 1, 2, 3, 4 }
Indicate, which mode to compute. Select between:
- divide the number of common columns in reference and test
alignment by the total number of columns in the test alignment
(the traditional C score described in Thompson1999,
also known as “precision” score in applications of information
retrieval),
- divide the number of common columns in reference and test
alignment by the total number of columns in the reference
alignment (also known as “recall” score in applications of
information retrieval),
- divide the number of common columns in reference and test
alignment by the average number of columns in reference and test
alignment, or
- combine the scores of mode 1 and mode 2 by computing
their F-score, using the formula
,
where p is the precision (mode 1) and r is the recall
(mode 2).
|