Recent uploads

  • May 22, 2026 (v3)
    Presentation
    Open
    Data Papers, Data statements: comment visibiliser le travail investi dans vos données
    Muller, Floriane

    Présentation utilisée lors du rendez-vous de l'information scientifique organisé par la Bibliothèque de l'Université de Genève le 22 mai 2026 et consacré aux Data Papers et aux Data Statements. Objectif(s) : Comprendre l'intérêt des Data Statement, et comment en rédiger un. Comprendre la spécificité du Data Paper et les objectifs de ce...

    Uploaded on May 21, 2026

    Part of Bibliothèque de l'Université de Genève

    2 more versions exist for this record

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  • April 20, 2026 (v1)
    Dataset
    Open
    Data for Article: Cryo-HIM-SIMS on the npSCOPE
    Taubitz, Tatjana De Castro, Dr. Olivier Andersen, Dustin

    This data sets contains the raw data files of data published in the article "Cryo-HIM-SIMS on the npSCOPE: Correlative topographic, transmitted and SIMS imaging at cryogenic temperatures". The manuscript can be found at: https://doi.org/10.1021/acs.analchem.5c06908 .csv files are text files containing meta data for SIMS spectra...

    0
    3
  • May 21, 2026 (Glimpse2LowPassImputation_development_v0.0.16)
    Software
    Open
    github.com/broadinstitute/warp/scANVI
    broadinstitute

    Pipeline for cell type label transfer on Multiome data using SCVI and SCANVI models. Integrates single-cell RNA (GEX) and ATAC data with an annotated reference to transfer cell type labels via semi-supervised deep generative models.

    Uploaded on May 21, 2026

    Part of Dockstore

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  • May 21, 2026 (Glimpse2LowPassImputation_development_v0.0.16)
    Software
    Open
    github.com/broadinstitute/warp/WholeGenomeReprocessing
    broadinstitute

    WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...

    Uploaded on May 21, 2026

    Part of Dockstore

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  • May 21, 2026 (Glimpse2LowPassImputation_development_v0.0.16)
    Software
    Open
    github.com/broadinstitute/warp/WholeGenomeGermlineSingleSample
    broadinstitute

    Announcing a new site for WARP documentation! WARP documentation has moved! Read more about our pipelines and repository on the new WARP documentation site! WARP summary WARP (WDL Analysis Research Pipelines) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform...

    Uploaded on May 21, 2026

    Part of Dockstore

    79 more versions exist for this record

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  • May 21, 2026 (Glimpse2LowPassImputation_development_v0.0.16)
    Software
    Open
    github.com/broadinstitute/warp/vds_to_vcf
    broadinstitute

    Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...

    Uploaded on May 21, 2026

    Part of Dockstore

    76 more versions exist for this record

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  • May 21, 2026 (Glimpse2LowPassImputation_development_v0.0.16)
    Software
    Open
    github.com/broadinstitute/warp/VariantCalling
    broadinstitute

    WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...

    Uploaded on May 21, 2026

    Part of Dockstore

    82 more versions exist for this record

    1391
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  • May 21, 2026 (Glimpse2LowPassImputation_development_v0.0.16)
    Software
    Open
    github.com/broadinstitute/warp/UltimaGenomicsWholeGenomeCramOnly
    broadinstitute

    Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...

    Uploaded on May 21, 2026

    Part of Dockstore

    98 more versions exist for this record

    2079
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  • May 21, 2026 (Glimpse2LowPassImputation_development_v0.0.16)
    Software
    Open
    github.com/broadinstitute/warp/UltimaGenomicsJointGenotyping
    broadinstitute

    WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...

    Uploaded on May 21, 2026

    Part of Dockstore

    79 more versions exist for this record

    1131
    392
  • May 21, 2026 (Glimpse2LowPassImputation_development_v0.0.16)
    Software
    Open
    github.com/broadinstitute/warp/UltimaGenomicsWholeGenomeGermline
    broadinstitute

    WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...

    Uploaded on May 21, 2026

    Part of Dockstore

    78 more versions exist for this record

    1168
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